1st | 6th | 8th |
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Distance = 14 | Distance = 5 | Distance = 35 |
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a | b | c |
- The graph-distance is measured from the most 5’ end to the most 3’ end of the sequence. The RNA secondary structure brings the leader transcription regulation site (L-TRS) in close spatial proximity with the body transcription regulation site (B-TRS). The structures (a), (b) and (c) are the most stable structures considering the sub-ensembles which are the sets of structures of graph-distance 14, 5 and 35, respectively. These are the 1st, 6th and 8th most favoured graph-distances in the Boltzmann ensemble.