From: BicPAM: Pattern-based biclustering for biomedical data analysis
Dataset | ID | Terms | Bicluster with bestp-value | ♯Genes |
---|---|---|---|---|
dlblc | Dl1 | translational elongation; cytosolic part; translational initiation | 4.49E-5 | 81 |
 | Dl2 | Golgi apparatus; MHC protein complex | 5.40E-5 | 83 |
 | Dl3 | defense response; receptor activity; single organism signaling; vacuole; cell communication | 4.91-5 | 162 |
 | Dl4 | immune response; response to interferon-gamma | 1.06E-4 | 58 |
 | Dl5 | immune system process | 1.27E-4 | 52 |
 | Dl6 | response to interferon-gamma; cellular response to chemical stimulus; response to cytokine stimulus | 0.001 | 60 |
 | Dl7 | membrane-enclosed lumen; cell division; cell cycle process | 2.92E-12 | 81 |
 | Dl8 | small molecule binding; catalytic activity; cell cycle process | 6.14E-8 | 108 |
hughes | H1 | mitochondrion organization; organellar ribosome; mitochondrial matrix; mitochondrial translation | 2.70E-39 | 416 |
 | H2 | cell periphery; cell wall constituent; oxidoreductase activity; cell wall organization; sexual sporulation | 1.73E-4 | 370 |
 | H3 | ribonucleoprotein complex biogenesis; nucleus | 3.61E-30 | 426 |
 | H4 | cellular amino acid metabolic/biosynthetic process; carboxylic acid metabolic/biosynthetic process | 1.3E-25 | 581 |
 | H5 | organonitrogen compound metabolic process; sulfur compound metabolic process | 1.62E-4 | 504 |
 | H6 | macromolecular complex; intracell. non-membrane-bounded organelle; membrane-enclosed lumen | 4.80E-14 | 512 |
gasch | G1 | nitrogen compound metabolic proc.; carboxylic/organic amino acid processes; structural cytoskeleton | 1.84E-16 | 434 |
 | G2 | cellular carbohydrate metabolic process; cytoplasm | 2.01E-7 | 265 |
 | G3 | generation of precursor metabolites and energy; tricarboxylic acid cycle | 1.16E-14 | 954 |
 | G4 | endomembrane system; retrotransposon nucleocapsid; pore; viral procapsid maturation | 4.34E-6 | 102 |
 | G5 | nucleolus; ncRNA metabolic process | 1.03E-61 | 611 |
 | G6 | intracell. non-membrane-bounded organelle; structural molecule activity | 5.33E-76 | 293 |
 | G7 | cytosolic part; ribosomal subunit | 1.61E-88 | 460 |
 | G8 | membrane-enclosed lumen; nuclear lumen; intracell. organelle lumen | 1.17E-47 | 263 |
 | G9 | mitochondrion organization; mitochondrial part; cytoplasmic part; protein complex biogenesis | 2.06E-26 | 592 |
 | G10 | cellular response to oxidative stress; generation of precursor metabolites and energy | 2.37E-4 | 296 |
 | G11 | binding; nuclear part; preribosome | 2.87E-11 | 508 |
 | G12 | cellular process involved in reproduction | 0.001 | 435 |
 | G13 | macromolecular complex; cell part; structural molecule activity | 6.05E-29 | 1442 |
 | G14 | vacuolar transport; chromosome | 5.09E-7 | 606 |
 | G15 | regulation of cellular (macromolecule) biosynthetic process; protein modification process | 2.28E-13 | 1019 |
 | G16 | organic substance catabolic process; carbohydrate metabolic process; cytoplasm | 1.02E-15 | 648 |
 | G17 | ribonucleoprotein complex biogenesis (general) | 1.08E-94 | 784 |