Fig. 3From: Fast and accurate structure probability estimation for simultaneous alignment and folding of RNAs with Markov chainsEvaluation of the agreement between the structure probabilistic and scoring models with the reference energies for a tRNA transcript. Each dot corresponds to a suboptimal structure of the tRNA. The structures are sorted according to reference free energy in the x-axis, computed by Vienna package RNAsubopt tool. The probabilities and scores are scaled to the energy dimension (Eq. 4). Annotated correlations of each panel are the Spearman’s correlation coefficients between the x and y axes. Each correlation corresponds to an individual entry within the corresponding distributions that are shown as violin plots in Fig. 2Back to article page